Introduction
Despite substantial advances in the management of cardiovascular disease (CVD), CVD is the leading cause of morbidity and mortality worldwide and one of the challenges facing global health care systems [1, 2]. Ischemic heart disease (IHD), which affects 128 million people, also causes major socioeconomic burdens [3]. It is estimated that 4 million people die of CVD each year in China [4]. Acute myocardial infarction (AMI) is the most emergent form of IHD and involves the rupture of coronary atheromatous plaques. AMI causes acute thrombotic occlusion of the coronary artery, severely restricting or completely blocking blood flow to the myocardium, resulting in cardiomyocyte death [5]. Although biomarkers of myocardial necrosis are widely used in clinical diagnosis, the morbidity and mortality of AMI remain high [6].
Microparticles (MPs) range in size from 0.1 µm to 1 µm and are produced by a variety of cells, including endothelial cells (EMPs), leukocytes (LMPs), monocytes (MMPs), and platelets (PMPs) [7–9]. Studies have proven that MPs are messengers that mediate intercellular communication and play extremely important roles in the occurrence and development of CVDs [10, 11]. Chen et al. [7] showed that MPs may induce endothelial dysfunction and the inflammatory response, which is a key contributor to atherosclerosis, through different mechanisms [12]. Zacharia et al. [13] found that MPs increase inflammation and thrombosis in acute coronary syndrome (ACS) patients, and their concentration is positively correlated with the degree of coronary artery stenosis in ACS patients. A previous study revealed elevated levels of EMPs in AMI patients, and EMP levels are associated with the degree of coronary artery disease and prognostic risk [14].
To explore the molecular mechanism underlying AMI, researchers have conducted proteomics analysis of the proteins in the blood of patients with AMI. One study performed a differential proteomic analysis of plasma from patients with ST-segment elevation myocardial infarction (STEMI) and patients with stable coronary artery disease (SCAD) and identified proteins involved in thrombosis [15]. Proteomic analysis of plasma from patients with postmyocardial infarction heart failure revealed 212 differentially expressed proteins (DEPs) that were significantly associated with subsequent heart failure events [16]. Proteomic studies have shown that a sustained decrease in the serum levels of the glycated form of apolipoprotein J in the early stages of AMI indicates a worsening of the progression of cardiac events and may identify patients who experience persistent ischemia after AMI [17]. However, these studies focused primarily on peripheral blood, not coronary blood, from patients with AMI. Therefore, proteomic studies of MPs from the coronary blood of patients with AMI may provide meaningful data for the early diagnosis of AMI.
Measuring the expression of specific factors in the plasma of AMI patients is helpful for improving the speed of diagnosis, and we believe that measuring the expression of MP proteins in the coronary blood of AMI patients can better indicate the severity of myocardial infarction and provide an accurate and effective prognosis. This study selected AMI patients and SCAD patients for comparative analysis. In spite of the difficulty in obtaining coronary blood samples and performing proteomics analysis on MPs, the selection of coronary blood, which is an innovative feature of this study, may better reflect the mechanism underlying the pathogenesis of acute thrombosis in AMI patients. Additionally, this approach may have a certain effect on guiding the diagnosis and treatment of diseases in the future.
Methods
Study subjects
Study subjects were selected from among patients who underwent coronary angiography for the evaluation of AMI and SCAD in the Cardiology Department of People’s Hospital of Xinjiang Uygur Autonomous Region from June 2018 to January 2020. It was declared that all studies in this experimental study involving human participants, human materials or human data are conducted in accordance with the Declaration of Helsinki. This study was approved by the Ethics Committee of People’s Hospital of Xinjiang Uygur Autonomous Region (No. 2017041), and informed consent was obtained at enrolment. According to the inclusion and exclusion criteria ([18] Refer to the description in our previous article), samples were obtained from 5 AMI patients and 5 SCAD patients.
MPs collection
The subjects underwent percutaneous coronary intervention via a radial artery approach. After rapid deflation of the balloon, 10 mL coronary blood was collected, and the balloon was removed by the guide wire. The specimens were stored in three equal parts in a container containing EDTA. Blood samples were obtained by centrifugation at 3500 × g for 15 min at 4°C, and the MPs were stored at –80°C.
Preparation of protein samples
A certain volume of protein lysis solution (7 M urea, 2% SDS, 1 × Protease Inhibitor Cocktail before use) was added to the samples. Then, the samples were fragmented with an ultrasonic cell fragmentation instrument. The lysis products were centrifuged at ١٣,000 rpm for 20 min at 4°C, the middle layers were removed and transferred to new 1.5-mL EP tubes. The aspirated supernatants were centrifuged at 13,000 rpm for 20 min at 4°C, the middle layers were aspirated and transferred to new 1.5-mL EP tubes. Finally, the samples were centrifuged at 13,000 rpm for 15 min at 4°C, and the precipitates were redissolved in 6 M guanidine hydrochloride and 300 mM TEAB. The concentrations of the samples were determined again. The samples were placed in a refrigerator at 4°C for use, and the concentrations were determined by the BCA method after partial dilution.
Protein filter-aided sample preparation
100-μg samples of protein solutions were mixed with 25 mM ammonium bicarbonate to a constant volume. The samples were then reduced in 1 M dithiothreitol and denatured by incubation for 1 h at 57°C. Then, the concentrates were mixed with 10 μL of 1 M iodoacetamide and incubated in the dark at room temperature for 40 min. Reduced alkylated proteins were added to 10 K ultrafiltration devices and centrifuged at 12,000 rpm. After centrifugation, ammonium bicarbonate buffer was added to the ultrafiltration tubes, and the samples were washed 4 times. Subsequently, trypsin was added to the filters, and the samples were incubated at 37°C overnight. The peptides were collected by centrifugation of the filter units the next day and then dried using heat.
Desalination of the peptides
The desalting method was as follows: (1) The dried mixed peptide was dissolved with 0.1% trifluoroacetic acid (TFA) solution; (2) The desalting column was activated with 100% acetonitrile; (3) The desalting column was balanced with 0.1% TFA solution; (4) The redissolved sample was added to the desalting column and centrifuged; (5) A 0.1% TFA solution was added to clean the desalting column; (6) A 50% acetonitrile solution was added, the tube was centrifuged, the peptides were eluted, and a new EP tube was used to collect the elution; (7) The elution was centrifuged to concentrate and dry to remove acetonitrile.
Liquid chromatography–mass spectrometry
The vacuum-dried samples were redissolved with 0.1% FA, and a 1–2 µg sample was taken for analysis. The samples were separated using an Easy-NLC 1000 (Thermo Scientific, USA). The peptides were loaded into an analytical column (C18, 2 µm, 75 µm × 20 cm) at a flow rate of 200 nL/min. The mass spectrometer was Orbitrap Fusion (Thermo Scientific, USA). The data-dependent scanning mode was used in tandem mass spectrometry (Data Dependent Acquisitio, DDA). MS spectra were acquired at a resolution of 60,000 FWHM. The mass charge ratio range was set to 400–1,600 m/z. In HCD fragmentation mode, the peptides were fragmented with a collision energy of 35%. The samples were run in duplicate.
Bioinformatics analysis
The Homo sapiens protein database was used for reference in this study. Proteome Discoverer 2.4 software was used for peptide and protein identification. Functional annotation and enrichment analyses were performed for Gene Ontology (GO), including biological process (BP), cellular component (CC) and molecular function (MF). The KEGG database was used to classify the identified proteins. Physical and functional analyzes of the protein–protein interactions of the selected proteins were performed using STRING v11.0 software (https:/string-db.org/).
Ethics approval and consent to participate
This study was approved by the Ethics Committee of People’s Hospital of Xinjiang Uygur Autonomous Region (No. 2017041), and informed consent was obtained at enrolment.
Statistical analysis
Measurement data with a normal distribution are presented as the mean ± standard deviation ( ± s), and comparisons between groups were performed by independent sample T tests. Measurement data with a nonnormal distribution are presented as median (P25–P75), and comparisons between groups were performed by the Mann–Whitney test. The classification data are presented as the number of cases (percentage), and comparisons between groups were performed by the Pearson c2 test. P < 0.05 was considered statistically significant. The volcano map, heatmap, GO enrichment analysis figures, and KEGG enrichment analysis figures were prepared by R.
Results
Characterization of the study population
Table 1 presents the baseline characteristics and biochemical parameters of the study subjects. There was no significant difference in age, sex, body mass index, smoking habits, drinking habits, hypertension, diabetes, atorvastatin use, acetylsalicylic acid use, or clopidogrel use between the AMI and SCAD groups (p > 0.05). There were no significant differences between the two groups in terms of the levels of white blood cells (WBCs), neutrophils, triglycerides (TGs), high-density lipoprotein (HDL), low-density lipoprotein (LDL) or other indicators (p > 0.05). However, there was a significant difference between the two groups in terms of troponin T (CnT) levels (p < 0.05).
AMI (n = 5) |
SCAD (n = 5) |
t/χ2/Z |
P |
|
Gender: |
0.000 |
1.000 |
||
Male |
4 (80.0) |
4 (80.0) |
||
Female |
1 (20.0) |
1 (20.0) |
||
Cigarette |
2 (40.0) |
3 (60.0) |
0.400 |
0.527 |
Alcohol |
2 (40.0) |
2 (40.0) |
0.000 |
1.000 |
Age [years] |
57.80 ± 13.35 |
60.80 ± 3.42 |
–0.487 |
0.639 |
BMI [kg/m2] |
27.14 ± 2.12 |
27.68 ± 4.42 |
–0.249 |
0.810 |
Hypertension |
3 (60) |
4 (80) |
0.476 |
0.490 |
Diabetes |
2 (40) |
2 (40) |
0.000 |
1.000 |
Atorvastatin |
4 (80) |
3 (60) |
0.476 |
0.490 |
ASA |
5 (100) |
4 (80) |
1.111 |
0.292 |
Clopidogrel |
5 (100) |
4 (80) |
1.111 |
0.292 |
WBC [109/L] |
7.71 ± 1.68 |
7.79 ± 2.78 |
–0.055 |
0.957 |
Neutrophils |
4.75 ± 1.24 |
5.64 ± 3.15 |
–0.592 |
0.570 |
hs-CRP |
9.39 ± 7.56 |
6.09 ± 4.30 |
0.379 |
0.714 |
TBIL |
11.4 (8.55–19.26) |
18.8 (8.2–22.85) |
–0.733 |
0.463 |
DBIL |
5.8 (3.95–7.88) |
8.4 (3.7–14.79) |
–0.629 |
0.530 |
IBIL |
6.7 (4.05–11.38) |
7.17 (2.55–10.27) |
–0.104 |
0.917 |
ALT |
28 (22.5–50.5) |
32 (17–55.75) |
–0.105 |
0.917 |
AST |
41 (17.5–66) |
19 (16.5–40.77) |
–0.524 |
0.600 |
BUN |
6.66 ± 1.78 |
5.16 ± 1.37 |
1.494 |
0.174 |
Creatinine |
68.4 (64.75–77.95) |
61.2 (48.85–95.5) |
–0.522 |
0.602 |
Triglyceride |
1.35 ± 0.42 |
1.54 ± 1.32 |
–0.307 |
0.767 |
HDL |
0.86 ± 0.23 |
0.86 ± 0.22 |
–0.014 |
0.989 |
LDL |
1.95 ± 0.28 |
1.93 ± 0.58 |
0.063 |
0.951 |
Troponin T |
0.73 ± 0.27 |
0.05 ± 0.03 |
2.500 |
< 0.001 |
Analysis of DEPs between the AMI and SCAD groups
A total of 904 proteins and 3010 peptides were identified and quantified in the MPs of all the studied groups. Comparing the AMI group with the SCAD group, a total of 198 proteins were significantly altered, including 85 proteins that were significantly upregulated and 113 proteins that were significantly downregulated. Listed in Table 2 are the top 20 upregulated proteins and the top 20 downregulated proteins. The volcano plots based on the 198 DEPs are shown in Figure 1. The differentially upregulated proteins are presented as red dots, and the differentially downregulated proteins are presented as green dots. The total number of upregulated and downregulated DEPs is shown in a heatmap (Fig. 2). In the heatmap, red represents the differentially expressed proteins with high expression in the samples, and blue represents the differentially expressed proteins with low expression in the samples.
Sequence |
Accession |
Protein symbol |
Description |
AMI vs. SCAD |
|
Ratio |
P |
||||
1 |
P04733 |
MT1F |
Metallothionein-1F |
0.00274 |
0.044 |
2 |
P53004 |
BIEA |
Biliverdin reductase A |
0.01826 |
0.034 |
3 |
P08779 |
K1C16 |
Keratin, type I cytoskeletal 16 |
0.03368 |
0.002 |
4 |
O43657 |
TSN6 |
Tetraspanin-6 |
0.03922 |
0.013 |
5 |
Q9BWD1 |
THIC |
Acetyl-CoA acetyltransferase, cytosolic |
0.05196 |
0.005 |
6 |
O95436 |
NPT2B |
Sodium-dependent phosphate transport |
0.07310 |
0.049 |
7 |
Q7Z404 |
TMC4 |
Transmembrane channel-like protein 4 |
0.08152 |
< 0.001 |
8 |
P13807 |
GYS1 |
Glycogen [starch] synthase, muscle |
0.08234 |
0.040 |
9 |
O60825 |
F262 |
6-phosphofructo-2-kinase/fructose-2,6- |
0.08488 |
0.021 |
10 |
Q7L804 |
RFIP2 |
Rab11 family-interacting protein 2 |
0.09502 |
0.004 |
11 |
Q9Y490 |
Talin-1 |
Talin-1 |
0.09549 |
< 0.001 |
12 |
P22059 |
OSBP1 |
Oxysterol-binding protein 1 |
0.09969 |
0.001 |
13 |
P62241 |
RS8 |
40S ribosomal protein S8 |
0.10792 |
0.028 |
14 |
O43598 |
DNPH1 |
2’-deoxynucleoside 5’-phosphate |
0.11289 |
0.040 |
15 |
P21980 |
TGM2 |
Protein-glutamine gamma- |
0.11395 |
< 0.001 |
16 |
P34932 |
HSP74 |
Heat shock 70 kDa protein 4 |
0.11984 |
< 0.001 |
17 |
P23396 |
RS3 |
40S ribosomal protein S3 |
54.46225 |
0.044 |
18 |
P15170 |
ERF3A |
Eukaryotic peptide chain release factor |
39.50445 |
0.005 |
19 |
p02724 |
CD235 |
Glycophorin-A |
28.00383 |
< 0.001 |
20 |
Q9P289 |
STK26 |
Serine/threonine-protein kinase 26 |
25.99137 |
0.038 |
21 |
Q8IXS0 |
FAM217A |
Protein FAM217A |
22.67748 |
0.046 |
22 |
Q92598 |
HS105 |
Heat shock protein 105 kDa |
21.27487 |
0.030 |
23 |
O14672 |
ADA10 |
Disintegrin and metalloproteinase |
20.83476 |
0.017 |
24 |
Q6PGP7 |
TTC37 |
Tetratricopeptide repeat protein 37 |
19.71420 |
0.020 |
25 |
Q07866 |
KLC1 |
Kinesin light chain 1 |
15.57566 |
0.008 |
26 |
P62913 |
RL11 |
60S ribosomal protein L11 |
14.08757 |
0.018 |
27 |
Q96DG6 |
CMBL |
Carboxymethylenebutenolidase homolog |
12.98631 |
0.038 |
28 |
P02538 |
K2C6A |
Keratin, type II cytoskeletal 6A |
12.77784 |
0.024 |
29 |
O60925 |
PFD1 |
Prefoldin subunit 1 |
12.14382 |
0.020 |
30 |
Q96A49 |
SYAP1 |
Synapse-associated protein 1 |
11.71504 |
0.045 |
31 |
O43776 |
SYNC |
Asparagine–tRNA ligase, cytoplasmic |
11.63383 |
0.017 |
32 |
P62714 |
PP2AB |
Serine/threonine-protein phosphatase 2A |
11.39490 |
0.032 |
Gene Oncology enrichment analysis of the DEPs between the AMI and SCAD groups
To gain a broader and more accurate understanding of the potential biological relevance of the significantly altered proteins, GO enrichment analysis was applied to determine the relative abundance and biological function of the significantly altered proteins identified in the present study. GO enrichment analysis was performed on the DEPs between the AMI and SCAD groups. In the GO enrichment analysis, the molecular function, cellular component and biological process were examined. For cellular component, the proteins identified in this study were enriched in the cytosol, anchored component of the synaptic vesicle membrane, Golgi membrane, perinuclear region of the cytoplasm, early endosome membrane, microtubule organizing center, and secretory granule lumen. Furthermore, for molecular function, the proteins were enriched in GDP binding, GTPase activity, GTP binding, glucose binding, myosin versus binding, amino acid binding, GTP-dependent protein binding, and protein serine/threonine. Additionally, in terms of biological process, the proteins were enriched in protein transport, neutrophil degranulation, coenzyme A biosynthetic process, antigen processing and presentation, regulation of macroautophagy, Golgi to endosome transport, execution phase of apoptosis, and the cellular protein modification process (Fig. 3). The cytosol was obviously enriched in cellular component. GDP binding was obviously enriched in molecular function. Protein transport was obviously enriched in biological process (Fig. 4).
p-value. The size of the dots represented count. The shapes of the dots represented different categories.
KEGG pathway enrichment analysis of the DEPs between the AMI and SCAD groups
KEGG pathway enrichment analysis was conducted for the DEPs between the AMI and SCAD groups. To provide insight into the biological pathways in which the MP proteins from this population are involved, the proteins were further mapped with the KEGG pathway database. As shown in Figure 5, the proteins were involved in pantothenate and coenzyme A (CoA) biosynthesis, starch and sucrose metabolism, amino sugar and nucleotide sugar metabolism, glutathione metabolism, AMPK signalling pathway, insulin signalling pathway, glucagon signalling pathway, renal cell carcinoma, ECM-receptor interaction, fructose and mannose metabolism, and small cell lung cancer.
Protein–protein interaction regulatory network analysis
To visualize the predicted interactions between the DEPs in AMI, a regulatory network was constructed from unordered DEPs using the STRING database (Fig. 6). It was found that the DEPs formed a complex regulatory network containing 113 nodes and 111 edges with an average node degree of 1.96 and a clustering coefficient of 0.39. The expected number of edges for this analysis was 58. The protein–protein interactions enrichment p value was 0.046 × 10–12, which indicated that the DEPs were at least partially biologically connected as a group.
Discussion
Acute myocardial infarction is a serious CVD and a major cause of morbidity and mortality worldwide. Atherosclerosis is the most common cause of CVD, and endothelial dysfunction caused by hypercholesterolemia is the first step of atherosclerosis. Endothelial dysfunction results in a decrease in nitric oxide (NO) production and is associated with a trend towards vasoconstriction, thrombosis, and lipid accumulation in the arterial wall. Inflammatory activation and plaque rupture followed by thrombosis usually lead to the onset of AMI.
In this study, proteomic analysis of MPs in the coronary blood of AMI patients suggested the potential pathogenesis of acute AMI events, providing a new direction for understanding the disease. Considering the clinical differences between AMI patients and SCAD patients, which are mainly related to the pathophysiology of the acute and stable states, SCAD patients were selected as the control group. Our team’s previous research found that MPs play extremely important roles in the occurrence and development of CVD [14]. Therefore, in this study, a proteomic analysis was performed of the MPs from the coronary blood of patients with AMI.
A total of 198 differentially expressed proteins were identified in the present study, of which 85 were upregulated and 113 were downregulated. Notably, many proteins are differentially regulated in MPs after AMI, suggesting that MPs are recruited to the site of thrombi and may play an important role in the process of acute thrombosis. It is well known that thrombosis and inflammation are interrelated processes [15]. In the current study, the differential expression of proteins in MPs suggests that neutrophil degranulation is involved in the biological process of GO enrichment analysis. In AMI, proteomic analysis of differentially expressed proteins at the site of acute thrombosis showed that neutrophils aggregated at the site of thrombosis and participated in thrombosis, contributing to infarct size through specific functions, such as respiratory burst and reactive oxygen species (ROS) release [19, 20]. Therefore, it was concluded that neutrophil secretion of DEPs in MPs plays an important role in acute events of AMI.
Multiple mechanisms can lead to impaired endothelial function, including increased vascular oxidative stress, activation of redox-sensitive transcriptional pathways, and reduced endothelial nitric oxide synthase (NOS) function. In vascular disease states, MPs promote atherosclerosis and thrombosis by inhibiting the production of NO by NOS and causing endothelial dysfunction [21–23]. RhoA acts as a switch, binding to either inactive GDP or active GTP [24]. GTP-RhoA levels were increased in multiple endothelial injury sites [25]. In addition, proteomics analysis reported the significant enrichment of nucleotide-binding proteins in the proteome, and these proteins included intracellular transport proteins, ATP-regulating molecules, and Ras-related proteins that promote platelet-platelet interactions [26]. Transfer of cytosolic regulatory subunits to the plasma membrane is a prerequisite for oxidase activation and ROS production. Key processes of oxidase activation determine the translocation of cell membranes and the exchange of GDP in the GTP-regulated domain. In GO enrichment analysis, the current study identified that DEPs were enriched in GDP binding, GTPase activity, and GTP binding. Herein, it was speculated that MPs may affect the production of oxidase, leading to the activation of GTP-related signaling pathways, the increase of GTPase activity, and the increase of GTP and GDP exchange, thus causing increased vascular oxidative stress and impaired endothelial function. KEGG pathway enrichment analysis revealed that the identified proteins were mainly involved in amino sugar and nucleotide sugar metabolism and the Ras signalling pathway. In conclusion, the DEPs in MPs may promote GDP-binding and GTP-binding activities at sites of endothelial injury by inhibiting the production of NO by endothelial NOS (eNOS), thus initiating the Ras signalling pathway, affecting platelet-platelet interactions, and promoting the occurrence of acute thrombotic events.
One of the important mechanisms by which MPs cause endothelial dysfunction is stimulating ROS production. Lipid peroxidation is an oxidation process in which oxidants, such as ROS, attack unsaturated lipids and produce a wide range of oxidation products. Pantothenic acid, which is a precursor of CoA, acts as a prosthetic group and participates in lipid metabolism [27]. Chronic inflammation characterized by modified lipid accumulation is a key contributor to atherosclerosis and a gradual process [28]. Bindesboll et al. [29] showed that the Golgi is required for the regulation of cholesterol metabolism. The Golgi is an intracellular component with significantly high abundance and may be one of the key determinants in the development of AMI. Research has demonstrated that the activity of glutathione peroxidases (GPXs) could affect the amount of lipid peroxidation and thereby damage the integrity of cell membranes [30]. Cubedo et al. [31] mentioned that the GPX-2 content in thrombi plays a clear role in oxidative stress. The present study showed that DEPs were enriched in the cytosol, anchored component of the synaptic vesicle membrane, and Golgi membrane. KEGG pathway enrichment analysis revealed that the identified proteins were mainly involved in pantothenate and CoA biosynthesis, starch and sucrose metabolism, glutathione metabolism, amino sugar and nucleotide sugar metabolism, fructose and mannose metabolism, and glycerolipid metabolism. Therefore, the DEPs in MPs may promote the occurrence of acute thrombotic events by influencing oxidative stress and lipid metabolism. The enrichment analysis of the DEPs in the AMI group and SCAD group showed that the Golgi apparatus stood out as a new organelle and may be the key to regulating the pathogenesis of AMI.
However, the present research has some limitations. Because the specimens came from coronary blood, it was not easy to obtain, and considering the lack of funds at that time, these were the selected cases for study. Although the current sample size has certain limitations, it will be expanded in future studies.
Conclusions
In conclusion, the present results identified differences in the expression of coronary blood proteins in AMI and SCAD patients, indicating that MPs play significant roles in accelerating endothelial dysfunction, promoting inflammation occurrence, participating in lipid oxidation, and precipitating plaque rupture followed by thrombosis. These events, in turn, cause the development of acute thrombotic events.
Acknowledgments
The authors thank Nanjing Enhancer Bio-Technology Co., Ltd. (Nanjing, China) for its assistance with mass spectrometry analysis.
Funding
This study was supported by the National Natural Science Foundation of China (No: 82060076).